✅ Abierto
Module 0: Introduction
Study guide, R basics and a help forum for programming questions
Module 1: Introduction to microbiome data
Sequencing techniques, data types (16S, WGS, metadata), example applications
Module 2: From sequences to counts
Quality control of reads, taxonomic and functional assignment
Module 3: Comparing microbiomes
Relative versus absolute abundance, taxonomic and functional richness, evenness and diversity
Module 4: Ordination
Dimension reduction: arranging samples according to their taxonomic and functional composition in two-dimensional space
Module 5: Taxon/function associations
Network construction: computing and interpreting associations between taxa and functions
Module 6: Your favourite microbiome
Databases and journals for microbiome data and guidelines for doing your own analysis
Module 7: Final exam
Complete the course by passing the quiz or by completing a microbiome analysis